Payroll Reconciliation identifies differences in employees’ basic information between SelectHR and SelectPay. Once differences are found, you can update either system to make the records match.
Run Payroll Reconciliation
To run payroll reconciliation, follow the steps below.
Click Admin, then click Payroll Reconciliation.
Click Reconcile, then choose one of the following options.
By Bulk Employee Selection: Select individual or multiple employees to reconcile.
By Pay Frequency: Reconcile all employees on a specific pay frequency (e.g. monthly).
Select the relevant records, then click Reconcile Employee(s) with Payroll or Reconcile Pay Frequency. This marks the employees for reconciliation. The process runs in the background via the payroll service.
Click Admin, then click Payroll Reconiliation.
Click Employee Differences. Any differences will display here with a count per employee.
Drill into a record to view individual differences.
Review the differences and select the records to update.
Choose Update HR or Update Payroll to indicate the direction. The Update Direction field will confirm your selection.
Reset the list if needed by clicking Reset Current List.
Click Confirm Updates to update the system.
📌 Note: Updating SelectHR applies changes immediately. Updating SelectPay places changes in pending status for approval.
Additional notes
Capitalisation differences may appear.
Accents in employee names may appear as differences.
Reconcile a full employee at once for reliable updates.